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How to use LyX for articles in Journals of the Institute of Electrical and Electronics Engineers (IEEE).
LyX includes the template file IEEEtran.lyx.
Some IEEE journals propose use or even require to use the font package MathTime Professional 2 (mtpro2). If you installed this package to your LaTeX distribution, you can load it in the document preamble of your LyX document with the line